Since its inception, the Allen Institute for Brain Science has assessed gene expression in the brain of mouse, human, and non-human primate in developing, adult, and aged individuals. Such atlases represent a key step towards understanding the functional genomics of the nervous system and provide a transcriptional baseline for neurogenetic studies of normal and abnormal human brain function. These open resources explore where genes in the brain are expressed in both global and local context, and how this expression changes during development and in aging and disease. For studies of gene expression in the context of cell types, please visit our cell types page.
A unique multimodal atlas of the adult mouse brain, featuring anatomic and genomic data.
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A unique multimodal atlas of the adult human brain, featuring anatomic and genomic data.
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A detailed atlas of gene expression across 7 stages of development.
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The BrainSpan project is a detailed atlas of gene expression across human development.
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The NIH Blueprint Non-Human Primate Atlas characterizes the developing rhesus macaque brain.
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A detailed atlas of gene expression across the adult and juvenile mouse spinal cord.
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Download and explore single cell gene expression data from several mouse, human, and macaque brain structures.
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A multifaceted resource for exploring the cellular and molecular basis of Alzheimer's Disease from our Seattle-AD consortium
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A dataset for exploring the neuropathology and genomic features of disease and aging.
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IvyGAP is a dataset for exploring the anatomic and genomic basis of glioblastoma.
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Visualize which human genes are expressed differently across individuals
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A dataset for exploring expression of 25 genes in neocortex of individuals with and without autism
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A dataset for exploring expression of 60 genes in prefrontal cortex of individuals with and without schizophrenia
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A dataset for exploring gene expression in the mouse brain for five conditions of sleeping and waking.
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High-resolution ISH data characterizing expression of selected neurotransmitter system genes in the adult human brain
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